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Paleoclimate records from the tropical Andes are scarce, and the variability of glacial-interglacial cycles is still not well characterized. Lake Junin, in the Peruvian Andes, offers a unique and continuous paleoclimate archive that spans the last 700,000 years. Here, we explore the potential of organic compounds in reconstructing Andean paleoclimate over the last 20,000 years. To address this, we first evaluated the preservation of organic matter in the lake’s sediments. The Carbon Preference Index (CPI) suggests that n-alkanes have not been altered, and their H isotope composition can be used as paleo precipitation proxies. Furthermore, biomarkers from Eustigmatophyte algae (long chain diols) and diatoms (loliolide/isololiolide) have been identified, and can be used to reconstruct the hydrogen isotopic composition of lake water. The contrast between rainfall and lake water will be a good tool for understanding lake water inputs through time as well as evaporation and aridity. Changes in n-alkane chain length will be used to identity the terrestrial plant (long chain n-alkanes) and aquatic macrophyte inputs (mid-chain n-alkanes), with potential implications for interpreting past lake level change as a function of climate. Finally, distributions of br-GDGTs (branched glycerol dialkyl glycerol tetraethers) will be used to reconstruct past temperature changes. With these proxies, we aim to characterize climate variability at the end of the Last Glacial Maximum (LGM) and the Holocene, with a focus on characterizing climate variability in the light of teleconnections between the South American Summer Monsoon and global climate patterns and their relationship with hydroclimate in the Amazon Basin. 

Abstract Global climate during the Holocene was relatively stable compared to the late Pleistocene. However, evidence from lacustrine records in South America suggests that tropical latitudes experienced significant water balance variability during the Holocene, rather than quiescence. For example, a tight coupling between insolation and carbonate δ¹⁸O records from central Andean lakes (e.g., Lakes Junín, Pumacocha) suggest water balance is tied directly to South American summer monsoon (SASM) strength. However, lake carbonate δ¹⁸O records also incorporate information about temperature and evaporation. To overcome this ambiguity, clumped and triple oxygen isotope records can provide independent constraints on temperature and evaporation. Here, we use clumped and triple oxygen isotopes to develop Holocene temperature and evaporation records from three central Andean lakes, Lakes Junín, Pumacocha, and Mehcocha, to build a more complete picture of regional water balance (P–E). We find that Holocene water temperatures at all three lakes were stable and slightly warmer than during the latest Pleistocene. These results are consistent with global data assimilations and records from the foothills and Amazon basin. In contrast, evaporation was highly variable and tracks SASM intensity. The hydrologic response of each lake to SASM depends greatly on the physical characteristics of the lake basin, but they all record peak evaporation in the early to mid‐Holocene (11,700 to 4,200 years BP) when regional insolation was relatively low and the SASM was weak. These results corroborate other central Andean records and suggest synchronous, widespread water stress tracks insolation‐paced variability in SASM strength.